IDF special forces on Wednesday intercepted a ship in the Red Sea carrying an Iranian arms shipment headed for the Gaza Strip, Israel’s military said.

Israeli naval commandos from the elite Shayetet 13 unit boarded and took control of the “Klos-C” merchant ship, sailing under the Panama flag, at around 5 a.m. They encountered no resistance and there were no casualties reported on either side.

The army said soldiers carried out a preliminary inspection of the ship and found several dozen advanced Syrian M-302 missiles, with a range of up to 200 kilometers (125 miles) and a payload of up to 170 kilograms (375 pounds). The missiles were hidden in shipping containers also carrying sacks of concrete.

The incident took place 1,500 kilometers (930 miles) from Israel’s coast, in the Red Sea, off the Sudanese-Eritrean border. Israel had been tailing the ship for several days before the operation was launched.

The ship had a crew of 17, who were being interrogated by Israeli security forces. Defense Minister Moshe Ya’alon said crew members were apparently unaware of the ship’s secret cargo.

The vessel had reportedly set sail from Iran 10 days ago and was set to reach Sudan on Thursday. From there, the weaponry would have been smuggled into Gaza.

The IDF said the ship was being towed to Eilat, a journey which would take several more days, where the ship’s cargo would be properly and extensively inspected.

IDF Chief of Staff Benny Gantz confers with Defense Minister Moshe Ya'alon at the Navy war room during Wednesday morning's operation by naval commandos  during which they captured a Iranian shipment of weapons on its way to Gaza (photo credit: Ariel Hermoni/ Ministry of Defense)

IDF Chief of Staff Benny Gantz confers with Defense Minister Moshe Ya’alon at the Navy war room during Wednesday morning’s operation by naval commandos during which they captured a Iranian shipment of weapons on its way to Gaza (photo credit: Ariel Hermoni/ Ministry of Defense)

IDF Chief of Staff Lt. Gen. Benny Gantz personally oversaw the operation and Prime Minister Benjamin Netanyahu was briefed on its progress as he toured the US, the IDF said.

Netanyahu commended Gantz and Mossad Chief Tamir Pardo for their efficient work.

“I would like to congratulate the IDF, Israel’s intelligence apparatuses and of course the commanders and soldiers of the navy who carried out a flawless operation to capture a covert Iranian weapons ship,” Netanyahu said in a video statement.

“As it conducts talks with [world] powers, as Iran smiles and utters pleasantries, the same Iran is sending lethal weapons to terror organizations…via an intricate network of clandestine global operations…in order to hurt innocent civilians,” he added.

“This is the real Iran and this country must not be allowed to have nuclear weapons,” he said. “We will continue to do whatever is necessary to protect Israeli citizens.”

WATCH: Prime Minister Benjamin Netanyahu on the capture of the Iranian shipment

President Shimon Peres echoed the statement, calling on Iran to “stop bluffing.”

“This operation exposes the true face of Iran which says one thing but does the opposite. They put on an innocent face and send the most dangerous missiles to a terror organization that kills innocents, in violation of international law,” he said in a statement. “Iran must make up its mind either to tell the truth and respect international law or admit that it is all camouflage and we cannot trust their policy or declaration. The same is true for Hamas.”

Hamas said the interception was a “silly joke,” Reuters reported.

“This is a new Israeli lie aimed to justify and prolong the blockade of Gaza,” Taher Al-Nono, an adviser of Hamas Prime Minister Ismail Haniyeh, told the news agency.

Ya’alon said the intercepted shipment proved Iran was exporting terror “with the express purpose of destabilizing the Middle East.”

“This Iranian attempt to transfer weapons to the Gaza Strip is additional evidence that Gaza is a terrorist entity under Iranian auspices preparing to strike deep into Israel,” he added.

Because of a labor dispute in the Foreign Ministry, Israel will not file an official complaint to the United Nations Security Council over the Iranian weapons shipment, a representative for the workers’ union said.

The Foreign Ministry’s Workers Union, which on Tuesday initiated far-reaching work sanctions, instructed Israeli ambassador to the UN Ron Prosor not to file an official complaint, as had originally been planned.

The military said the interception operation originated several months ago, when IDF intelligence identified the transfer of Syrian M-302 rockets from Damascus to Tehran through Damascus International Airport. Intelligence officials found the move odd, as arms are usually transferred from Iran to Syria, not vice versa.

The shipment was then moved to Iran’s Bandar Abbas port and loaded onto the “Klos-C.” The ship initially sailed to the Iraqi port of Umm Qasr where it was loaded with containers carrying bags of cement, to help conceal the weaponry and blur its Iranian origin.

The route of the Iranian weapons shipment captured by the IDF on Wednesday, March 5 (Photo credit: IDF)

The route of the Iranian weapons shipment captured by the IDF on Wednesday, March 5 (Photo credit: IDF)

The ship then set sail to Port Sudan. From there the weapons would have been smuggled into the Gaza Strip through the Sinai Peninsula.

IDf spokesman Lt. Col. Peter Lerner, said that, despite the deep rift between Iran and Hamas, the weapons cargo “was meant for all terror organizations, including Hamas.”

Vice Admiral Eliezer “Cheney” Marom, former commander of the Israeli Navy, told a group of reporters that the captain of the Panamian ship carried “a fake cargo manifest,” claiming that all cargo had been loaded on board in Iraq.

He added that there is a special unit within the Iranian Quds Force charged exclusively with smuggling weapons to terror organizations and activities related to that goal are carried out on “an almost day-to-day basis.”

The cement bags covering the missiles were marked “Grey Cement. Made in Iran.”

The military noted Wednesday that while the “Klos-C” was not the first Iranian arms shipment captured by Israel over the past few years, it stood out due to “the lethality and quality of its cargo.” While previous shipments had carried mortars, mid-range rockets and light-weapons ammunition, the latest captured cargo carried missiles with a much larger range and warheads of a much heavier payload.

Syrian M-302 missiles were used by Hezbollah during the Second Lebanon War to hit the Israeli cities of Haifa and Afula, the army said.

IDF Navy commander Maj. Gen. Ram Rothberg, center, is seen on board the Klos-C as he inspects a cargo container carrying concealed Iranian weaponry, March 5, 2014 (Photo credit: IDF)

IDF Navy commander Maj. Gen. Ram Rothberg, center, is seen on board the Klos-C as he inspects a cargo container carrying concealed Iranian weaponry, March 5, 2014 (Photo credit: IDF)

The military noted that Iran has made many attempts in the past to smuggle weaponry to Gaza.

In March 2011 navy commandos stopped civilian vessel “Victoria” as it headed from Syria to Egypt, and discovered 50 tons of Iranian weaponry on board. In January 2009 Cypriot merchant vessel “Monchegors” was found to contain a cache of Iranian weapons during an inspection by Cypriot authorities. Another ship boarded by IDF forces in November of that same year, the “Francop,” was carrying 500 tons of weaponry in 36 unmarked cargo crates

In 2002 the military captured the “Karine-A” as it carried 50 tons of weaponry from Iran to Gaza.